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Submissions from 2017

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SecA Functions in vivo as a Discrete Anti-Parallel Dimer to Promote Protein Transport, Tithi Banerjee, Christine Lindenthal, and Donald B. Oliver

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The Stories Tryptophans Tell: Exploring Protein Dynamics of Heptosyltransferase I from Escherichia coli, Joy M. Cote, Carlos A. Ramirez-Mondragon, Zarek S. Siegal, Daniel J. Czyzyk, Jiali Gao, Yuk Y. Sham, Ishita Mukerji, and Erika A. Taylor

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Analysis of Meiotic Chromosome-Associated Protein Dynamics Using Conditional Expression in Budding Yeast, Amy MacQueen and Beth Rockmill

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Evolutionary Covariance Combined with Molecular Dynamics Predicts a Framework for Allostery in the MutS DNA Mismatch Repair Protein, Bharat Makhani, Kelly M. Thayer, Manju Hingorani, and David L. Beveridge

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Lysine-Specific Demethylase-1 (LSD1) Depletion Disrupts Monogenic and Monoallelic Odorant Receptor (OR) Expression in an Olfactory Neuronal Cell Line, Rutesh N. Vyas, Diane Meredith, and Robert P. Lane

Submissions from 2016

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Single-Molecule FRET to Measure Conformational Dynamics of DNA Mismatch Repair Proteins, J. W. Gauer, S. LeBlanc, P. Hao, R. Qiu, B. C. Case, M. Sakato, Manju Hingorani, D. A. Erie, and K. R. Weninger

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Mismatch binding, ADP–ATP exchange and intramolecular signaling during mismatch repair, Manju Hingorani

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Lysine-specific demethylase-1 (LSD1) is compartmentalized at nuclear chromocenters in early post-mitotic cells of the olfactory sensory neuronal lineage, S. Kilinc, A. Savarino, J. H. Coleman, J. E. Schwob, and Robert P. Lane

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Photophysical Characterization of Enhanced 6-Methylisoxanthopterin Fluorescence in Duplex DNA, Andrew Moreno, Joseph L. Knee, and Ishita Mukerji

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Chromosome Synapsis Alleviates Mek1- Dependent Suppression of Meiotic DNA Repair, Vijayalakshmi V. Subramanian, Amy MacQueen, Gerben Vader, Miki Shinohara, Aurore Sanchez, Valérie Borde, Akira Shinohara, and Andreas Hochwagen

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Synaptonemal Complex Proteins of Budding Yeast Define Reciprocal Roles in MutSγ-Mediated Crossover Formation, Karen Voelkel-Meiman, Shun-Yun Cheng, Savannah J. Morehouse, and Amy MacQueen

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Holliday Junction Thermodynamics and Structure: Coarse-Grained Simulations and Experiments, Wujie Wang, Laura M. Nocka, Brianne Z. Wiemann, Daniel M. Hinckley, Ishita Mukerji, and Francis W. Starr

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Conserved SecA Signal Peptide-Binding Site Revealed by Engineered Protein Chimeras and Förster Resonance Energy Transfer, Q. Zhang, Y. Li, Rich Olson, Ishita Mukerji, and Don Oliver

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Determination of the Oligomeric State of SecYEG Protein Secretion Channel Complex using in vivo Photo- and Disulfide-crosslinking, Z. Zheng, A. Blum, T. Banerjee, Q. Wang, V. Dantis, and Don Oliver

Submissions from 2015

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MutL traps MutS at a DNA mismatch, R. Qiu, M. Sakato, E. J. Sacho, H. Wilkins, X. Zhang, P. Modrich, Manju Hingorani, D. A. Erie, and K. R. Weninger

Submissions from 2014

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Dissecting the cis and trans Elements That Regulate Adjacent-Gene Coregulation in Saccharomyces cerevisiae, J. T. Arnone, J. R. Arace, A. R. Soorneedi, T. T. Citino, T. L. Kamitaki, and Michael McAlear

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A new system for naming ribosomal proteins, N. Ban, R. Beckmann, J. H.D. Cate, J. D. Dinman, F. Dragon, S. R. Ellis, D. L.J. Lafontaine, L. Lindahl, A. Liljas, J. M. Lipton, Michael McAlear, P. B. Moore, H. F. Noller, J. Ortega, V. G. Panse, V. Ramakrishnan, C. M.T. Spahn, T. A. Steitz, M. Tchorzewski, D. Tollervey, A. J. Warren, J. R. Williamson, D. Wilson, A. Yonath, and M. Yusupov

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Sequestration within nuclear chromocenters is not a requirement for silencing olfactory receptor transcription in a placode-derived cell line, S. Kilinc, D. T. Meredith, and Robert P. Lane

Submissions from 2013

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Defining the Solution State Dimer Structure of Escherichia coli SecA Using Förster Resonance Energy Transfer, S. M. Auclair, Don Oliver, and Ishita Mukerji

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Distinct Structural Alterations in Proliferating Cell Nuclear Antigen Block DNA Mismatch Repair, L. M. Dieckman, E. M. Boehm, Manju Hingorani, and M. T. Washington

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DnaN clamp zones provide a platform for spatiotemporal coupling of mismatch detection to DNA replication, J. S. Lenhart, A. Sharma, Manju Hingorani, and L. A. Simmons

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Vibrio cholerae Cytolysin Recognizes the Heptasaccharide Core of Complex N-Glycans with Nanomolar Affinity, S. Levan, S. De, and Rich Olson

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Two by Two: Co-Regulating Adjacent Gene Pairs in Yeast and Beyond, Michael McAlear

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Yeast Tdh3 (Glyceraldehyde 3-Phosphate Dehydrogenase) Is a Sir2-Interacting Factor That Regulates Transcriptional Silencing and rDNA Recombination, A. E. Ringel, R. Ryznar, H. Picariello, K. Huang, A. G. Lazarus, and Scott G. Holmes

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Slow Conformational Changes in MutS and DNA Direct Ordered Transitions between Mismatch Search, Recognition and Signaling of DNA Repair, A. Sharma, C. Doucette, F. N. Biro, and Manju Hingorani

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Histone Variant H2A.Z Functions in Sister Chromatid Cohesion in Saccharomyces cerevisiae, U. Sharma, D. Stefanova, and Scott G. Holmes

Submissions from 2012

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Analysis of High-Affinity Binding of Protein Kinase R to Double-Stranded RNA, B. Husain, Ishita Mukerji, and J. Cole

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Sir3 and Epigenetic Inheritance of Silent Chromatin in Saccharomyces cerevisiae, T. Motwani, M. Poddar, and Scott G. Holmes

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Resonance Raman Spectroscopy, Ishita Mukerji

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Molecular Dynamics Structure Prediction of a Novel Protein–DNA Complex: Two HU Proteins with a DNA Four-way Junction, E. G. Wheatley, S. N. Pieniazek, I. Vitoc, Ishita Mukerji, and David Beveridge

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Impact of Individual Proliferating Cell Nuclear Antigen-DNA Contacts on Clamp Loading and Function on DNA, Y. Zhou and Manju Hingorani