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Submissions from 2017

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Species, Frederick M. Cohan

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A Theory-Based Pragmatism for Discovering and Classifying Newly Divergent Species of Bacterial Pathogens, Frederick M. Cohan and Sarah M. Kopac

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Invasions and Extinctions Through the Looking Glass of Evolutionary Ecology, Robert I. Colautti, Jake M. Alexander, Katrina M. Dlugosch, Stephen R. Keller, and Sonia E. Sultan

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Genetic basis of octanoic acid resistance in Drosophila sechellia: Functional Analysis of a Fine-Mapped Region, J. M. Andrade López, S. M. Lanno, J. M. Auerbach, E. C. Moskowitz, L. A. Sligar, P. J. Wittkopp, and Joseph D. Coolon

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N-terminal Proteomics Assisted Profiling of the Unexplored Translation Initiation Landscape in Arabidopsis thaliana, Brynne E. Lycette, Jacob W. Glickman, Samuel J. Roth, Abigail E. Cram, Tae Hee Kim, Danny Krizanc, and Michael P. Weir

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Evolutionary Dynamics of Regulatory Changes Underlying Gene Expression Divergence among Saccharomyces Species, Brian P. H. Metzger, Patricia J. Wittkopp, and Joseph D. Coolon

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Evolution of the Cerebellar Sense of Self, John Montgomery and David Bodznick

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Effects of Dam Removal on Fish Community Interactions and Stability in the Eightmile River System, Connecticut, USA, Helen Mills Poulos and Barry Chernoff

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GABAergic Synapse Dysfunction and Repair in Temporal Lobe Epilepsy, Meghan A. Van Zandt and Janice R. Naegele

Submissions from 2016

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Hedgehog Promotes Production of Inhibitory Interneurons in Vivo and in Vitro from Pluripotent Stem Cells, Nickesha C. Anderson, Christopher Y. Chen, and Laura Grabel

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Transcriptome and in Vitro Differentiation Profile of Human Embryonic Stem Cell Derived NKX2.1-Positive Neural Progenitors, Christopher Y. Chen, Alex Plocik, Nickesha C. Anderson, Daniel Moakley, Trinithas Boyi, Carolyn Dundes, Chelsea Lassiter, Brenton R. Graveley, and Laura Grabel

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Multiple Interaction Types Determine the Impact of Ant Predation of Caterpillars in a Forest Community, Robert E. Clark, Timothy E. Farkas, Isaac Lichter-Marck, Emily J. Johnson, and Michael Singer

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Bacterial Speciation: Genetic Sweeps in Bacterial Species, Frederick M. Cohan

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Bacterial species concepts, Frederick M. Cohan

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Evolutionary potential for increased invasiveness: High-Performance Polygonum cespitosum genotypes are competitively superior in full sun, Caleb T. Corliss and Sonia E. Sultan

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Bacillus nakamurai sp. nov., a black pigment producing strain, Christopher A. Dunlap, Lauren P. Saunders, David A. Schisler, Timothy D. Leathers, Naveed Naeem, Frederick M. Cohan, and Alejandro P. Rooney

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DNA Methylation Mediates Genetic Variation for Adaptive Transgenerational Plasticity, Jacob J. Herman and Sonia E. Sultan

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Limits to Future Adaptation in the Invasive Plant Polygonum cespitosum: Expression of Functional and Fitness Traits at Elevated CO2, Tim Horgan-Kobelski, Silvia Matesanz, and Sonia E. Sultan

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Convulsive Seizures from Experimental Focal Cortical Dysplasia Occur Independently of Cell Misplacement, Lawrence S. Hsieh, John H. Wen, Kumiko Claycomb, Yuegao Huang, Felicia A. Harrsch, Fahmeed Hyder, Janice R. Naegele, Gordon F. Buchanan, and Angelique Bordey

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Gfap-positive radial glial cells are an essential progenitor population for later-born neurons and glia in the zebrafish spinal cord, Kimberly Johnson, Jessica Barragan, Sarah Bashiruddin, Cody J. Smith, Chelsea Tyrrell, Michael J. Parsons, Rosemarie Doris, Sarah Kucenas, Gerald B. Downes, Carla M. Velez, Caitlin Schneider, Catalina Sakai, Narendra Pathak, Katrina Anderson, Rachael Stein, Stephen Devoto, Jeff S. Mumm, and Michael J.F. Barresi

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Embryonic stem cell-derived neural progenitors transplanted to the hippocampus migrate on host vasculature, Chelsea M. Lassiter, Julian S. Gal, Sandy Becker, Nathaniel W. Hartman, and Laura Grabel

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Recombination does not hinder formation or detection of ecological species of Synechococcus inhabiting a hot spring cyanobacterial mat, Melanie C. Melendrez, Eric D. Becraft, Jason M. Wood, Millie T. Olsen, Donald A. Bryant, John F. Heidelberg, Douglas B. Rusch, Frederick M. Cohan, and David M. Ward

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Synaptic Sweet Talk: How Do Perineuronal Nets Contribute to Epileptogenesis and Neuroplasticity?, Janice R. Naegele

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MAGI-1 Interacts with Nephrin to Maintain Slit Diaphragm Structure through Enhanced Rap1 Activation in Podocytes, Jie Ni, Sujin Bao, Ruth I. Johnson, Bingbing Zhu, Jianhua Li, Justin Vadaparampil, Christopher M. Smith, Kirk N. Campbell, Florian Grahammer, Tobias B. Huber, John C. He, Vivette D. D’Agati, Andrew Chan, and Lewis Kaufman

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Osmotic and Heat Stress Effects on Segmentation, Julian Weiss and Stephen Devoto

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The adaptor protein Cindr regulates JNK activity to maintain epithelial sheet integrity, Hannah W.R. Yasin, Samuel H. van Rensburg, Christina E. Feiler, and Ruth I. Johnson

Submissions from 2015

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Cell Polarity and Neurogenesis in Embryonic Stem Cell-Derived Neural Rosettes, E. Banda, A. McKinsey, N. Germain, J. Carter, N. C. Anderson, and Laura Grabel

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The molecular dimension of microbial species: 1. Ecological distinctions among, and homogeneity within, putative ecotypes of Synechococcus inhabiting the cyanobacterial mat of Mushroom Spring, Yellowstone National Park, Eric D. Becraft, Jason M. Wood, Douglas B. Rusch, Michael Kühl, Sheila I. Jensen, Donald A. Bryant, David W. Roberts, Frederick M. Cohan, and David M. Ward

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Origin of the Turtle Body Plan, Ann C. Burke

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The global distribution of diet breadth in insect herbivores, M. L. Forister, V. Novotny, A. K. Panorska, L. Baje, Y. Basset, P. T. Butterill, L. Cizek, P. D. Coley, F. Dem, I. R. Diniz, P. Drozd, M. Fox, A. E. Glassmire, R. Hazen, J. Hrcek, J. P. Jahner, O. Kaman, T. J. Kozubowski, T. A. Kursar, O. T. Lewis, J. Lill, R. J. Marquis, S. E. Miller, H. C. Morais, M. Murakami, H. Nickel, N. A. Pardikes, R. E. Ricklefs, Michael Singer, A. M. Smilanich, J. O. Stireman, S. Villamarín-Cortez, S. Vodka, M. Volf, D. L. Wagner, T. Walla, G. D. Weiblen, and L. A. Dyer

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The Art of Setting Limits: Lessons from GABAergic Interneuron Transplantation, Jyoti Gupta and Janice R. Naegele

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Defensive mixology: combining acquired chemicals towards defence, Peri A. Mason and Michael Singer

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Evidence for rapid ecological range expansion in a newly invasive plant, Silvia Matesanz, Tim Horgan-Kobelski, and Sonia E. Sultan

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Blocking Astrocyte Transformation at the Dysfunctional Blood Brain Barrier, Janice R. Naegele

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Immature Interneurons Create a Lasting Impression, Janice R. Naegele, Laura Grabel, and Gloster B. Aaron

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The molecular dimension of microbial species: 3. Comparative genomics of Synechococcus isolates with different light responses and in situ diel transcription patterns of associated putative ecotypes in the Mushroom Spring microbial mat, Millie T. Olsen, Shane Nowack, Jason M. Wood, Eric D. Becraft, Kurt LaButti, Anna Lipzen, Joel Martin, Wendy S. Schackwitz, Douglas B. Rusch, Frederick M. Cohan, Donald A. Bryant, and David M. Ward

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Organism and Environment: Ecological Development, Niche Construction, and Adaptation, Sonia E. Sultan

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An ideal weed: plasticity and invasiveness in Polygonum cespitosum, Sonia E. Sultan and Silvia Matesanz

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Tbx6, Mesp-b and Ripply1 regulate the onset of skeletal myogenesis in zebrafish, S. E. Winder, R. A. Doris, C. M. Ferguson, A. C. Nelson, G. Valentin, H. Tan, A. C. Oates, F. C. Wardle, and Stephen Devoto

Submissions from 2014

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A Method for Exploring Adult Neurogenesis in the Songbird Brain, Kemal Asik, Jiang Liu Rao, and John R. Kirn

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Directed Differentiation of Human Embryonic Stem Cells into Neural Progenitors, Erin Banda and Laura Grabel

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Accuracy and efficiency of algorithms for the demarcation of bacterial ecotypes from DNA sequence data, J. C. Francisco, Frederick M. Cohan, and Danny Krizanc

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Long-Term Seizure Suppression and Optogenetic Analyses of Synaptic Connectivity in Epileptic Mice with Hippocampal Grafts of GABAergic Interneurons, K. W. Henderson, J. Gupta, S. Tagliatela, E. Litvina, X. Zheng, M. A. Van Zandt, N. Woods, E. Grund, D. Lin, S. Royston, Y. Yanagawa, Gloster B. Aaron, and Janice R. Naegele

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How Stable ‘Should’ Epigenetic Modifications Be? Insights from Adaptive Plasticity And Bet Hedging, J. J. Herman, H. G. Spencer, K. Donohue, and S. E. Sultan

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Genomic Heterogeneity and Ecological Speciation within One Subspecies of Bacillus subtilis, Sarah M. Kopac, Zhang Wang, Jane Wiedenbeck, Jessica Sherry, Martin Wu, and Frederick M. Cohan

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Molecular Phylogenetics of the Eastern and Western Blacknose Dace, Rhinichthys atratulus and R. obtusus (Teleostei: Cyprinidae), M. L. Kraczkowski and Barry Chernoff

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The struggle for safety: effectiveness of caterpillar defenses against bird predation, I. H. Lichter-Marck, M. Wylde, E. Aaron, J. C. Oliver, and Michael Singer

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Assessment of MS/MS Search Algorithms with Parent-Protein Profiling, M. S. Lin, J. J. Cherny, C. T. Fournier, S. J. Roth, Danny Krizanc, and Michael P. Weir

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The dawn of chelonian research: Turtles between comparative anatomy and embryology in the 19th century, Kate MacCord, Guido Caniglia, Jacqueline E. Moustakas-Verho, and Ann C. Burke

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Reduced consumption of protein-rich foods follows immune challenge in a polyphagous caterpillar, A. Peri Mason, Angela M. Smilanich, and Michael Singer

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A mixed diet of toxic plants enables increased feeding and anti-predator defense by an insect herbivore, P. A. Mason, M. A. Bernardo, and Michael Singer

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Reduced Consumption of Protein-Rich Foods Follows Immune Challenge in a Polyphagous Caterpillar, P. A. Mason, Angela M. Smilanich, and Michael S. Singer

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Contrasting levels of evolutionary potential in populations of the invasive plant Polygonum cespitosum, S. Matesanz, T. Horgan-Kobelski, and Sonia E. Sultan

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Genetic Diversity and Population Structure in Polygonum cespitosum: Insights to an Ongoing Plant Invasion, S. Matesanz, K. E. Theiss, K. E. Holsinger, and Sonia E. Sultan

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Enemy-Free Space for Parasitoids, S. M. Murphy, J. T. Lill, M. D. Bowers, and Michael Singer

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Fish assemblage response to a small dam removal in the Eightmile River system, Connecticut, USA, H. M. Poulos, K. E. Miller, M. L. Kraczkowski, A. W. Welchel, R. Heineman, and Barry Chernoff

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Herbivore diet breadth mediates the cascading effects of carnivores in food webs, Michael Singer, I. H. Lichter-Marck, T. E. Farkas, E. Aaron, K. D. Whitney, and K. A. Mooney

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Ecological Immunology Mediated by Diet in Herbivorous Insects, Michael Singer, Peri A. Mason, and Angela M. Smilanich

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Herbivore Diet Breadth Mediates the Cascading Effects of Carnivores in Food Webs, Michael S. Singer

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Ecological Immunology Mediated by Diet in Herbivorous Insects, Michael S. Singer, P. A. Mason, and Angela M. Smilanich

Submissions from 2013

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Species, Frederick M. Cohan

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Can caterpillar density or host-plant quality explain host-plant-related parasitism of a generalist forest caterpillar assemblage?, T. E. Farkas and Michael Singer

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Derivation and Isolation of NKX2.1-Positive Basal Forebrain Progenitors from Human Embryonic Stem Cells, Noelle Germain, Erin Banda, Sandy Becker, Janice R. Naegele, and Laura Grabel

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Science Choreography: A Movement-Based Approach to Biology Teaching, Laura Grabel, Michael P. Weir, Laurel F. Appel, Elizabeth Johnson, Richard McCarthy, and Liz Lerman

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Cell Adhesion During Drosophila Eye Development, Ruth I. Johnson

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Speedy Speciation in a Bacterial Microcosm: New Species Can Arise as Frequently as Adaptations within a Species, Alexander F. Koeppel, Joel O. Wertheim, Laura Barone, Nicole Gentile, Danny Krizanc, and Frederick M. Cohan

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High-performance genotypes in an introduced plant: insights to future invasiveness, S. Matesanz and Sonia E. Sultan

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Diversity in neotropical wet forests during the Cenozoic is linked more to atmospheric CO2 than temperature, Dana L. Royer and Barry Chernoff

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A resurrection study reveals rapid adaptive evolution within populations of an invasive plant, Sonia E. Sultan, T. Horgan-Kobelski, L. M. Nichols, C. E. Riggs, and R. K. Waples

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Body Wall Development in Lamprey and a New Perspective on the Origin of Vertebrate Paired Fins, F. Tulenko, D. McCauley, E. MacKenzie, S. Mazan, S. Kuratani, F. Sugahara, R. Kusakabe, and Ann C. Burke

Submissions from 2012

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Immunocytochemistry to Study Myogenesis in Zebrafish, N. C. Bird, S. E. Windner, and Stephen H. Devoto

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Planar Cell Polarity Controls Directional Notch Signaling in the Drosophila Leg, Amalia Capilla, Ruth I. Johnson, Maki Daniels, Maria Benavente, Sarah J. Bray, and Maximo Ibo Galindo

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Prokaryotic Sex: Eukaryote-like Qualities of Recombination in an Archaean Lineage, Frederick M. Cohan and S. Aracena

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The Variable Subdomain of Escherichia coli SecA Functions to Regulate SecA ATPase Activity and ADP Release, Sanchaita Das, Lorry M. Grady, Jennifer Michtavy, Yayan Zhou, Frederick M. Cohan, Manju Hingorani, and Donald B. Oliver

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Amino Termini of Many Yeast Proteins Map to Downstream Start Codons, C. T. Fournier, J. J. Cherny, K. Truncali, A. Robbins-Pianka, M. S. Lin, Danny Krizanc, and Michael P. Weir

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Demarcation of Bacterial Ecotypes from DNA Sequence Data: A Comparative Analysis of Four Algorithms, Juan Carlos Francisco, Frederick M. Cohan, and Danny Krizanc

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Teratocarcinoma Formation in Embryonic Stem Cell-DerivedNeural Progenitor Hippocampal Transplants, Noelle Germain, Nathaniel W. Hartman, Chunyu Cai, Sandy Becker, Janice R. Naegele, and Laura Grabel

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Genetic Manipulation of STEP Reverses Behavioral Abnormalities in a Fragile X Syndrome Mouse Mode, S. M. Goebel-Goody, E. D. Wilson-Wallis, S. Royston, S. Tagliatela, Janice R. Naegele, and Paul Lombroso

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Developmental Origin of Neural Stem Cells: The Glial Cell That Could, Laura Grabel

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Prospects for Pluripotent Stem Cell Therapies: Into the Clinic and Back to the Bench, Laura Grabel

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Field-based Insights to the Evolution of Specialization: Plasticity and Fitness Across Habitats in a Specialist/Generalist Species Pair, T. Griffith and Sonia E. Sultan

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Interactions Between Drosophila IgCAM Adhesion Receptors and Cindr, the Cd2ap/Cin85 Ortholog, Ruth I. Johnson, Sujin Bao, and Ross L. Cagin

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Diversity of Bacteria and Archaea in Hypersaline Sediment from Death Valley National Park, California, J.-S. Kim, M. Makama, J. Petito, N.-H. Park, Frederick M. Cohan, and R. S. Dungan

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Differentiation and Functional Incorporation of Embryonic Stem Cell-Derived GABAergic Interneurons in the Dentate Gyrus of Mice with Temporal Lobe Epilepsy, Xu Maisano, E. Litvina, S. Tagliatela, Gloster B. Aaron, Laura Grabel, and Janice R. Naegele

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Phenotypic Plasticity and Population Differentiation in an Ongoing Species Invasion, S. Matesanz, T. Horgan-Kobelski, and Sonia E. Sultan

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Anatomical plasticity in the adult zebra finch song system, K. S. McDonald and John Kirn

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CLC-3: A quantum leap in understanding mechanisms of GABA release, Janice R. Naegele

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SAVAs: Molecular Snipers for Silencing GABAergic Interneurons, Janice R. Naegele

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Embryonic Stem Cell Therapy for Intractable Epilepsy, Janice R. Naegele, M. C. Vemuri, and L. Studer

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BMP Regulation of Myogenesis in Zebrafish, S. E. Patterson, N. C. Bird, and Stephen H. Devoto

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Mapping the potential distribution of the invasive Red Shiner, Cyprinella lutrensis (Teleostei: Cyprinidae) across waterways of the conterminous United States, H. M. Plous, Barry Chernoff, P. L. Fuller, and D. Butman

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The World through an Interdisciplinary Lens, H. Poulos, B. Bannon, J. Isard, P. Stonebraker, Dana Royer, Gary Yohe, and Barry Chernoff

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Adult Neurogenesis Is Associated with the Maintenance of a Stereotyped, Learned Motor Behavior, C. L. Pytte, S. George, S. Korman, E. David, D. Bogdan, and John Kirn

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Abundance Trumps Quality: Bi-Trophic Performance and Parasitism Risk Fail to Explain Host Use in the Fall Webworm (Hyphantria cunea, Arctiidae), Michael S. Singer, P. A. Mason, S. R. Wilkes, and J. T. Lill

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The Quorum Sensing Diversity Within and Between Ecotypes of Bacillus subtilis, Polonca Stefanic, Francesca Decorosi, Carlo Viti, J. Petito, Frederick M. Cohan, and Ines Mandic-Mulec

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Propagation of Epileptiform Events across the Corpus Callosum in a Cingulate Cortical Slice Preparation, J. Walker, G. Storch, B. Quach-Wong, J. Sonnenfeld, and Gloster B. Aaron

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Fss/Tbx6 is Required for Central Dermomyotome Cell Fate in Zebrafish, S. E. Windner, N. C. Bird, S. E. Patterson, R. A. Doris, and Stephen H. Devoto

Submissions from 2011

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Fine-Scale Distribution Patterns of Synechococcus Ecological Diversity in the Microbial Mat of Mushroom Spring, Yellowstone National Park, Eric D. Becraft, Frederick M. Cohan, M. Kuhl, Sheila I. Jensen, and David M. Ward

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STEP Regulation of Seizure Thresholds in the Hippocampus, Stephen W. Briggs, Jeffrey Walker, Kemal Asik, Paul Lombroso, Janice R. Naegele, and Gloster B. Aaron

Migration of Transplanted Neural Stem Cells in Experimental Models of Neurodegenerative Diseases, Nathaniel W. Hartman, Laura Grabel, and Janice R. Naegele