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Submissions from 2009

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Contrasting Patterns of Transgenerational Plasticity in Ecologically Distinct Congeners, Sonia E. Sultan, Kasey Barton, and Amity M. Wilczek

The Role of Short Term Synaptic Plasticity in the Development and Spread of Seizures, K. S. Wilcox, Gloster B. Aaron, and M. A. Dichter

Submissions from 2008

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Hedgehog Serves as a Mitogen and Survival Factor During Embryonic Stem Cell Neurogenesis, Chunyu Cai, Jeffrey Thorne, and Laura Grabel

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IGF-1 Receptor-Mediated ERK/MAPK Signaling Couples Status Epilepticus to Progenitor Cell Proliferation in the Subgranular Layer of the Dentate Gyrus, Yun-Sik Choi, Hee-Yeon Cho, Kari R. Hoyt, Janice R. Naegele, and Karl Obrietan

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The Origins of Ecological Diversity in Prokaryotes, Frederick M. Cohan and Alexander F. Koeppel

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Visualizing the Lateral Somitic Frontier in the Mouse Using the Prx1Cre Transgenic, L. Durland, M. Sferlazzo, M. Logan, and Ann C. Burke

How the Turtle Gets Its Shell, S. F. Gilbert, Thomas Cebra, and Ann C. Burke

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Computational Intelligence in Electrophysiology: Trends and Open Problems, C. Gunay, T. G. Smolinski, W. W. Lytton, T. M. Morse, P. Gleeson, S. Crook, V. Steuber, A. Silver, H. Voicu, P. Andrews, H. Bokil, H. Maniar, C. Loader, S. Mehta, D. Kleinfeld, D. Thompson, P. P. Mitra, Gloster B. Aaron, and J. M. Fellous

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Nest of Origin Predicts Adult Neuron Addition Rates in the Vocal Control System of the Zebra Finch, Patrick Hurley, Carolyn Pytte, and John Kirn

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Statistical Significance of Precisely Repeated Intracellular Synaptic Patterns, Y. Ikegaya, M. Matsumoto, H. Y. Chiou, R. Yuste, and Gloster B. Aaron

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The Drosophila CD2AP/CIN85 Orthologue Cindr Regulates Junctions and Cytoskeleton Dynamics During Tissue Patterning, Ruth I. Johnson, Midori J. Seppa, and Ross L. Cagan

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Identifying the Fundamental Units of Bacterial Diversity: A Paradigm Shift to Incorporate Ecology into Bacterial Systematics, Alexander F. Koeppel, Elizabeth B. Perry, Johannes Sikorski, Ana Sofia Cunningham Warner, David M. Ward, Alejandro P. Rooney, E. Brambilla, Nora Connor, E. Nevo, R. M. Ratcliff, and Frederick M. Cohan

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Growth in the Larval Zebrafish Pectoral Fin and Trunk Musculature, S. E. Patterson, L. B. Mooks, and Stephen H. Devoto

Regulation and Function of Neuronal Replacement in the Avian Song System, Carolyn Pytte, Linda Wilbrecht, and John Kirn

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Polychaetoid Controls Patterning by Modulating Adhesion in the Drosophila Pupal Retina, Midori J. Seppa, Ruth I. Johnson, Sujin Bao, and Ross L. Cagan

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Genomics, Environmental Genomics and the Issue of Microbial Species, David M. Ward, Frederick M. Cohan, Devaki Bhaya, John F. Heidelberg, M. Kuhl, and Arthur R. Grossman

Submissions from 2007

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Population Level Functional Diversity in a Microbial Community Revealed by Comparative Genomic and Metagenomic Analyses, Devaki Bhaya, Arthur R. Grossman, Anne-Soisig Steunou, Natalia Khuri, Frederick M. Cohan, Natsuko Hamamura, Melanie C. Melendrez, M. M. Bateson, David M. Ward, and John F. Heidelberg

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Development and Evolution of the Vertebrate Mesoderm, Ann C. Burke

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Directing the Differentiation of Embryonic Stem Cells to Neural Stem Cells, Chunyu Cai and Laura Grabel

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Region-Specific Differentiation of Embryonic Stem Cell-derived Neural Progenitor Transplants into the Adult Mouse Hippocampus Following Seizures, Joseph E. Carpentino, Nathaniel W. Hartman, Laura Grabel, and Janice R. Naegele

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Status Epilepticus-Induced Somatostatinergic Hilar Interneuron Degeneration is Regulated by Striatal Enriched Protein Tyrosine Phosphatase, Yun-Sik Choi, Stanley L. Lin, Boyoung Lee, Pradeep Kurup, Hee-Yeon Cho, Janice R. Naegele, Paul Lombroso, and Karl Obrietan

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Estimating Bacterial Diversity from Environmental DNA: A Maximum Likelihood Approach, Frederick M. Cohan, Danny Krizanc, and Yun Lu

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A Systematics for Discovering the Fundamental Units of Bacterial Diversity, Frederick M. Cohan and Elizabeth B. Perry

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Hedgehog Acts Directly on the Zebrafish Dermomyotome to Promote Myogenic Differentiation, X. Feng, E. G. Adiarte, and Stephen H. Devoto

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Introduction: Ethics and Stem Cell Research, Laura Grabel and Lori Gruen

Stem Cell Research: The Ethical Issues, Lori Gruen, Laura Grabel, and Peter Singer

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Neuroprotective Strategies to Avert Seizure-Induced Neurodegeneration in Epilepsy, Janice R. Naegele

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Mass Spectrometric Analysis of Lipopeptides from Bacillus Strains Isolated from Diverse Geographical Locations, Neil P. J. Price, Alejandro P. Rooney, James L. Swezey, Elizabeth B. Perry, and Frederick M. Cohan

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Increasing Stereotypy in Adult Zebra Finch Song Correlates with a Declining Rate of Adult Neurogenesis, Carolyn Pytte, Miles Gerson, Janet Miller, and John Kirn

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The Teleost Dermomyotome, F. Stellabotte and Stephen H. Devoto

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Dynamic Somite Cell Rearrangements Lead to Distinct Waves of Myotome Growth, F. Stellabotte, B. Dobbs-McAuliffe, D. A. Fernandez, X. Feng, and Stephen H. Devoto

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Development in Context: the Timely Emergence of Eco-Devo, Sonia E. Sultan

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Global Patterning of the Vertebrate Mesoderm, B. B. Winslow, R. Takimoto, and Ann C. Burke

Submissions from 2006

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Reverse Optical Probing (ROPing) of Neocortical Circuits, Gloster B. Aaron and R. Yuste

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Towards a Conceptual and Operational Union of Bacterial Systematics, Ecology, and Evolution, Frederick M. Cohan

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Generality of Vertebrate Developmental Patterns: Evidence for a Dermomyotome in Fish, Stephen H. Devoto, W. Stoiber, C. L. Hammond, P. Steinbacher, J. R. Haslett, M. J. Barresi, S. E. Patterson, E. G. Adiarte, and S. M. Hughes

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Plastic and Constant Developmental Traits Contribute to Adaptive Differences in Co-Occurring Polygonum Species, Timothy M. Griffith and Sonia E. Sultan

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Concise Review: Scientific and Ethical Roadblocks to Human Embryonic Stem Cell Therapy, Lori Gruen and Laura Grabel

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Migration of F9 Parietal Endoderm Cells is Regulated by the ERK Pathway, Tao Hong and Laura Grabel

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Postnatal Cellular Contributions of the Hippocampus Subventricular Zone to the Dentate Gyrus, Corpus Callosum, Fimbria, and Cerebral Cortex, Ivan Navarro-Quiroga, Mariana Hernandez-Valdes, Stanley L. Lin, and Janice R. Naegele

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Imaging Brain Slices, A. Tashiro, Gloster B. Aaron, D. Aaronov, R. Cossart, D. Dumitriu, V. Fenstermaker, J. Goldberg, F. Hamzei-Sichani, Y. Ikegaya, S. Konur, J. Maclean, B. Nemet, V. Nikolenko, C. Portera, and R. Yuste

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Cyanobacterial Ecotypes in the Microbial Mat Community of Mushroom Spring (Yellowstone National Park, Wyoming) as Species-Like Units Linking Microbial Community Composition, Structure and Function, David M. Ward, M. M. Bateson, M. J. Ferris, M. Kuhl, A. Wieland, Alexander F. Koeppel, and Frederick M. Cohan

Submissions from 2005

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Re-evaluating Prokaryotic Species, Dirk Gevers, Frederick M. Cohan, Jeffrey G. Lawrence, Brian G. Spratt, Tom Coenye, Edward J. Feil, Erko Stackebrandt, Yves Van de Peer, Peter Vandamme, Fabiano L. Thompson, and Jean Swings

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Which Species Concept for Pathogenic Bacteria? An E-Debate., S. Godreuil, Frederick M. Cohan, H. Shah, and M. Tibayrenc

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Shade Tolerance Plasticity in Response to Neutral vs Green Shade Cues in Polygonum Species of Contrasting Ecological Breadth, Timothy M. Griffith and Sonia E. Sultan

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The Development of Muscle Fiber Type Identity in Zebrafish Cranial Muscles, L. P. Hernandez, S. E. Patterson, and Stephen H. Devoto

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Seedling Expression of Cross-Generational Plasticity Depends on Reproductive Architecture, M. R. Lundgren and Sonia E. Sultan

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Internal Dynamics Determine the Cortical Response to Thalamic Stimulation, J. N. Maclean, B. O. Watson, Gloster B. Aaron, and R. Yuste

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Roles for Rho/ROCK and Vinculin in Parietal Endoderm Migration, Evan Mills, Kristi Lamonica, Tao Hong, Thomas Pagliaruli, James Mulrooney, and Laura Grabel

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Ecological Consequences of Phenotypic Plasticity, Benjamin G. Miner, Sonia E. Sultan, Stephen G. Morgan, Diana K. Padilla, and Rick A. Relyea

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Oxidative Damage and Defective DNA Repair is Linked to Apoptosis of Migrating Neurons and Progenitors During Cerebral Cortex Development in Ku70-Deficient Mice, Roopashree Narasimhaiah, Alexander Tuchman, Stanley L. Lin, and Janice R. Naegele

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DNA Damage and Non-Homologous End-Joining in Excitotoxicity: Neuroprotective Role of DNA-Pkcs in Kainic Acid-Induced Seizures, Mohit Neema, Ivan Navarro-Quiroga, Magdalena Chechlacz, Karen L. Gilliams-Francis, Jia Liu, Kristi Lamonica, Stanley L. Lin, and Janice R. Naegele

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Environmentally Contingent Variation: Phenotypic Plasticity and Norms of Reaction, Sonia E. Sultan and Stephen C. Stearns

Submissions from 2004

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Developmental Plasticity and Human Health, Patrick Bateson, David Barker, Peter Gluckman, Tom Kirkwood, and Sonia E. Sultan

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Hedgehog Signaling in Murine Vasculogenesis and Angiogenesis, Noah Byrd and Laura Grabel

Gastrulation in Reptiles, E. Gilland and Ann C. Burke

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Population Differentiation and Plastic Responses to Drought Stress in the Generalist Annual Polygonum persicaria, M. Shane Heschel, Sonia E. Sultan, Susan Glover, and Dan Sloan

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Hedgehog Signaling is Required for Commitment but not Initial Induction of Slow Muscle Precursors, E. Hirsinger, F. Stellabotte, M. Westerfield, and Stephen H. Devoto

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Synfire Chains and Cortical Songs: Elastic Temporal Modules of Cortical Activity, Y. Ikegaya, Gloster B. Aaron, R. Cossart, D. Aaronov, I. Lampl, D. Ferster, and R. Yuste

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Hedgehog Signaling is Required for the Differentiation of ES Cells into Neurectoderm, Peter Maye, Sandy Becker, Henrike Siemen, Jeffrey Thorne, Noah Byrd, Joseph E. Carpentino, and Laura Grabel

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Promising Directions in Plant Phenotypic Plasticity, Sonia E. Sultan

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Neuron Addition and Loss in the Song System: Regulation and Function, Linda Wilbrecht and John Kirn

Submissions from 2003

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Different Patterns of Synaptic Transmission Revealed between Hippocampal CA3 Stratum Oriens and Stratum Lucidum Interneurons and Their Pyramidal Cell Targets, Gloster B. Aaron, K. S. Wilcox, and M. A. Dichter

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Electroreception: Extracting Behaviorally Important Signals from Noise, David Bodznick

Homeotic Genes: Animals, Ann C. Burke and S. Brown

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A New View of Patterning Domains in the Vertebrate Mesoderm, Ann C. Burke and J. L. Nowicki

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Gradual Evolution in Bacteria: Evidence from Bacillus Systematics, M. Feldgarden, N. Byrd, and Frederick M. Cohan

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PARP Cleavage, DNA Fragmentation, and Pyknosis During Excitotoxin-Induced Neuronal Death, Karen L. Gilliams-Francis, Aurora A. Quaye, and Janice R. Naegele

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The Promise of Ecological Developmental Biology, Sonia E. Sultan

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The Lateral Somitic Frontier: Mapping Mesodermal Populations in the Chick Embryo, R. Takimoto, J. L. Nowicki, and Ann C. Burke

Submissions from 2002

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Starting from Fins: Parallelism in the Evolution of Limbs and Genitalia. Part Two: Fins to Limbs, Ann C. Burke and E. R. Molinar

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Genetics of Childhood Disorders: XL. Stem Cell Research, Part 4: Neural Horticulture, Magdalena Chechlacz and Janice R. Naegele

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What Are Bacterial Species?, Frederick M. Cohan

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Functional Morphology and Developmental Biology of Zebrafish: Reciprocal Illumination from an Unlikely Couple, L. P. Hernandez, M. J. Barresi, and Stephen H. Devoto

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Error-Driven Motor Learning in Fish, John Montgomery, Guy Carton, and David Bodznick

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Asymmetric Localization of Frizzled and the Determination of Notch-Dependent Cell Fate in the Drosophila Eye, David Strutt, Ruth I. Johnson, Katherine Cooper, and Sarah J. Bray

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Metapopulation Structure Favors Plasticity over Local Adaptation, Sonia E. Sultan and Hamish G. Spencer

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Effects of Excess Thyroid Hormone on Cell Death, Cell Proliferation, and New Neuron Incorporation in the Adult Zebra Fince Telencephalon, P. K. Tekumalla, M. Tontonoz, M. A. Hesla, and John Kirn

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Vocal Control Neuron Incorporation Decreases with Age in the Adult Zebra Finch, Niangui Wang, Patrick Hurley, Carolyn Pytte, and John Kirn

Submissions from 2001

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Excitatory Synapses from CA3 Pyramidal Cells onto Neighboring Pyramidal Cells Differ from Those onto Inhibitory Interneurons, Gloster B. Aaron and M. A. Dichter

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Distinct Mechanisms Regulate Slow-Muscle Development, M. J. Barresi, J. A. D'Angelo, L. P. Hernandez, and Stephen H. Devoto

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Hox Genes And Axial Specification In Vertebrates, Ann C. Burke and J. L. Nowicki

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Role of DNA-Dependent Protein Kinase in Neuronal Survival, Magdalena Chechlacz, M. C. Vemuri, and Janice R. Naegele

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Bacterial Species and Speciation, Frederick M. Cohan

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Genetics of Central Nervous System Developmental Disorders, Janice R. Naegele and Paul Lombroso

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Bacillus sonorensis sp. nov., a Close Relative of Bacillus licheniformis, Isolated from Soil in the Sonoran Desert, Arizona, M. M. Palmisano, Lawrence K. Nakamura, K. E. Duncan, C. A. Istock, and Frederick M. Cohan

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Phenotypic Plasticity for Fitness Components in Polygonum Species of Contrasting Ecological Breadth, Sonia E. Sultan

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Elevated DNA Double Strand Breaks and Apoptosis in the CNS of scid Mutant Mice, M. C. Vemuri, E. Schiller, and Janice R. Naegele

Submissions from 2000

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The Evolution of Plant Ecophysiological Traits: Recent Advances and Future Directions, David D. Ackerly, Susan A. Dudley, Sonia E. Sultan, Johanna Schmitt, and James S. Coleman

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The Zebrafish Slow-Muscle-Omitted Gene Product is required for Hedgehog Signal Transduction and the Development of Slow Muscle Identity, M. J. Barresi, H. L. Stickney, and Stephen H. Devoto

Hox Genes and the Global Patterning of the Somitic Mesoderm, Ann C. Burke

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Barriers to Genetic Exchange between Bacterial Species: Streptococcus pneumoniae Transformation, J. Majewski, Piotr Zawadzki, P. Pickerill, Frederick M. Cohan, and C. W. Dowson

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Hox Genes and Morphological Identity: Axial Versus Lateral Patterning in the Vertebrate Mesoderm, J. L. Nowicki and Ann C. Burke

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Protein-Coding Genes as Molecular Markers for Ecologically Distinct Populations: The Case of Two Bacillus Species, T. Palys, E. Berger, I. Mitrica, Lawrence K. Nakamura, and Frederick M. Cohan

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Targeted Neuronal Death Affects Neuronal Replacement and Vocal Behavior in Adult Songbirds, Constance Scharff, John Kirn, Matthew Grossman, Jeffrey D. Macklis, and Fernando Nottebohm

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Somite Development in Zebrafish, H. L. Stickney, M. J. Barresi, and Stephen H. Devoto

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Phenotypic Plasticity for Plant Development, Function and Life History, Sonia E. Sultan

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Phenotypic Plasticity for Plant Development, Function and Life History, Sonia E. Sultan